Welcome to Kinex’s documentation!

Kinex is a workflow implemented in a Python package with the same name. Kinex infers causal kinases from phosphoproteomics data.

If you use Kinex, please cite Valeanu et. al, 2023, bioRxiv, doi: https://doi.org/10.1101/2023.11.23.568445.

This documentation includes the information about installation and usage of the package.

Contents:

• Installing kinex
  • Requirements
  • Installation from Conda
  • Installation from Source
• Using kinex
  • Import package and initialise data object
  • Use one of three main features of kinex
    • Get scores for a phospho-sequence
    • Kinases inference analysis
    • Drug comparison